Browsing Barker Group by Title
Now showing items 4-6 of 6
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Gene trees for orthologous groups from "The evolution of nitrogen fixation in cyanobacteria"
Phylogenetic trees for the orthologous groups predicted across 49 taxa of Cyanobacteria and 16 Proteobacteria by Latysheva et al. (2012, Bioinformatics 28:603-606; doi:10.1093/bioinformatics/bts008) are provided here. For ... -
Preprocessed gene trees from "Xenolog Classification"
Preprocessed gene trees from 49 taxa of Cyanobacteria and 16 Proteobacteria used by Darby et al. (2017, Bioinformatics 33:640-649; doi:10.1093/bioinformatics/btw686) are provided here. These consist of trees for 13623 of ... -
simpops.mac: population time series simulation script from "The effects of environmental perturbation and measurement error on estimates of the shape parameter in the theta-logistic model of population regulation"
The simpops.mac script simulates population time series for investigation of the effects of underlying parameters, environmental perturbation, measurement error and time series length on the estimation of theta in the ...
