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Browsing Royal (Dick) School of Veterinary Studies by Title 
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  • Royal (Dick) School of Veterinary Studies
  • Browsing Royal (Dick) School of Veterinary Studies by Title
  •   Edinburgh DataShare
  • College of Medicine & Veterinary Medicine
  • Royal (Dick) School of Veterinary Studies
  • Browsing Royal (Dick) School of Veterinary Studies by Title
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Browsing Royal (Dick) School of Veterinary Studies by Title

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      2020_Thesis_SupplementaryData_s1569052_Tissue-resident immune cells in health and disease: their heterogeneity and associated gene signatures 

      Patir, Anirudh; Freeman, Tom; McColl, Barry
      The dataset includes supplementary figures and tables in support of the University of Edinburgh thesis titled "Tissue-resident immune cells in health and disease: their heterogeneity and associated gene signatures".
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      An ADAMTS3 Missense Variant is Associated with Norwich Terrier Upper Airway Syndrome - Supporting Data 

      Marchant, Thomas; Dietschi, Elisabeth; Rytz, Ulrich; Schawalder, Peter; Hadji Rasouliha, Sheida; Harrington, Ronan S; Drögemüller, Michaela; Kidd, Jeffrey; Ostrander, Elaine A; Warr, Amanda; Watson, Mick; Argyle, David; Ter Haar, Gert; Clements, Dylan N; Leeb, Tosso; Schoenebeck, Jeffrey J
      This dataset comprises of Variant Call Format (VCF) files associated with the BAM files in this publication. The full BAM files will be submitted to European Nucleotide Archive.
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      Antigenic diversity in Theileria parva populations from cattle and African buffalo analysed using long read sequencing 

      Morrison, Liam; Allan, Fiona; Jayaraman, Siddharth
      East Coast fever (ECF) in cattle is caused by the tick-borne protozoan Theileria parva, and is transmitted by the three-host tick Rhipicephalus appendiculatus. The African buffalo (Syncerus caffer) is the natural host for ...
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      Assemblies of the gyr falcon 

      Griffin, Darren; Watson, Mick
      Whole genome assemblies are crucial for understanding a wide range of aspects of falcon biology including morphology, ecology and physiology and thus essential for their care and conservation. A key aspect of the genome ...
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      Assembly and validation of conserved long non-coding RNAs in the ruminant transcriptome 

      Bush, Stephen J; Muriuki, Charity; McCulloch, Mary E. B.; Farquhar, Iseabail L.; Clark, Emily L.; Hume, David A.
      mRNA-like long non-coding RNAs (lncRNA) are a significant component of mammalian transcriptomes, although most are expressed only at low levels, with high tissue-specificity and/or at specific developmental stages. This ...
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      Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen 

      Watson, Mick
      This dataset represents 913 draft bacterial and archaeal genomes assembled from over 800 gigabases of rumen metagenomic sequence data derived from 43 Scottish cattle, using both metagenomic binning and Hi-C-based ...
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      Blackbirds, thrushes, robins and starlings. Images of pathology and parasites. 

      Pennycott, Tom
      This dataset contributed to the Doctor of Veterinary Medicine & Surgery (DVM&S) thesis "Diseases of wild birds of the Orders Passeriformes and Columbiformes - a review of conditions reported from the United Kingdom and an ...
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      Boran BovineHD SNP data 

      Prendergast, James
      BovineHD SNP (single nucleotide polymorphism) data for 82 Boran cattle.
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      Border Collie array data for 58 dogs from Illumina 170k CanineHD BeadChip 

      Summers, Kim; Pugh, Carys; Carlisle, Ailsa
      Goniodysgenesis is a developmental abnormality of the anterior chamber of the eye. It is generally considered to be congenital in dogs (Canis lupus familiaris), and has been associated with glaucoma and blindness. ...
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      Breeding strategies for integrating new and orphan crops in production systems 

      Bancic, Jon; Dawson, Ian; Gorjanc, Gregor; Hoad, Steve; Odeny, Damaris; Ojulong, Henry; Hickey, John
      25/11/2021 Author: Jon Bancic Contact: jon.bancic@gmail.com Dataset consists of R scripts and datasets used for the analysis in Chapter 2, 3, 4 of my thesis. Each research chapter has its own directory and ...
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      Canine medial coronoid process disease microarray data 

      Johnson, Craig; Clements, Dylan
      The objective of this study was to identify differentially expressed genes associated with the process of medial coronoid process disease, primary to the development of osteoarthritis. The data were produced using Affymetrix ...
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      Characterisation of a second gain of function EDAR variant, encoding EDAR380R, in East Asia 

      Schoenebeck, Jeffrey; Riddell, Jon; Headon, Denis
      Bash scripts, R scripts, rehh output data.
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      Characterisation of the UK honey bee metagenome 

      Regan, Tim; Freeman, Tom; Barnett, Mark
      The European honey bee (Apis mellifera) plays a major role in pollination and food production, but is under threat from emerging pathogens and agro-environmental insults. As with other organisms, honey bee health is a ...
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      Chicken cecal metagenome assembled genomes 

      Glendinning, Laura; Watson, Kellie; Pallen, Mark; Stewart, Robert; Watson, Mick
      We sequenced DNA from cecal contents samples taken from 24 chickens belonging to either a fast or slower growing breed consuming either a vegetable-only diet or a diet containing fish meal. We utilised 1.6T of Illumina ...
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      Choughs. Images of eye/brain abnormalities and of internal parasites. 

      Pennycott, Tom
      This dataset contributed to the Doctor of Veterinary Medicine & Surgery (DVM&S) thesis "Diseases of wild birds of the Orders Passeriformes and Columbiformes - a review of conditions reported from the United Kingdom and an ...
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      CKCS CEL data 

      Markby, Greg
      The dataset is microrarray data collected from canine RNA samples. The experimental design of this project is to perform comparative analysis (unpaired one-way ANOVA) between normal canine mitral valves, late stage Myxomatous ...
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      Comparative profiling of murine CLN1 Thalamus and Cortex at early and late disease timepoints 

      Wishart, Thomas
      CLN1 disease or Infantile neuronal ceroid lipofuscinosis is a fatal inherited neurodegenerative lysosomal storage disease of early childhood with no currently available therapy. CLN1 disease is caused by mutations in the ...
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      A comparison of livestock movement network-methods and implications for disease control in developing countries 

      Muwonge, Adrian; Bessell, Paul; Porphyre, Thibaud; Motta, Paolo; Rydevik, Gustaf; Devailly, Guillaume; Egbe, Franklyn; Kelly, Robert; Handel, Ian; Mazeri, Stella; Bronsvoort, Mark
      The use of network analysis to support livestock disease control in low middle-income countries (LMICs) has historically been hampered by the cost of generating empirical data in the absence of animal movement recording ...
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      Competitive environments affect aggression of dairy cows (Bos taurus) 

      Malerbi, Giulia; McKeegan, Dorothy; Martin, Jessica
      We examined aggressive interactions between dairy cows in a range of competitive environments associated with different resources (pasture, milking line, cubicles and feed-face) and determined their relationship with ...
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      Comprehensive transcriptional profiling of the gastrointestinal tract of ruminants from birth to adulthood 

      Bush, Stephen J.; McCulloch, Mary E. B.; Muriuki, Charity; Salavati, Mazdak; Davis, Gemma M.; Farquhar, Iseabail L.; Lisowski, Z. M.; Archibald, Alan L.; Hume, D. A.; Clark, E. L.
      One of the most significant physiological challenges to neonatal and juvenile ruminants is the development and establishment of the rumen. Using a subset of RNA-Seq data from our high-resolution atlas of gene expression ...
       

       

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