• A test-retest fMRI dataset for motor, language and spatial attention functions 

      Gorgolewski, KJ; Storkey, A; Bastin, Mark E; Whittle, IR; Wardlaw, Joanna; Pernet, Cyril R
      A test-retest dataset was acquired to validate fMRI tasks used in pre-surgical planning. In particular, five task-related fMRI time series (finger, foot and lip movement, overt verb generation, covert verb generation, overt ...
    • IgM antibodies exhibit preferential binding to apoptotic and non-apoptotic nucleated cells 

      Hesketh, E.E
      Data set characterising IgM antibody binding to non-apoptotic, apoptotic and permeable murine/human thymocytes and murine erythrocytes. Methodology used consisted of flow cytometry, confocal and electron microscopy. With ...
    • The human Voice Areas: spatial organisation and inter-individual variability in temporal and extra-temporal cortices. 

      Pernet CR; Belin P
      Abstract: FMRI studies increasingly examine functions and properties of non-primary areas of human auditory cortex. However there is currently no standardized localization procedure to reliably identify specific areas ...
    • Archiving and Sharing Functional MRI data 

      Pernet, Cyril
      This document describes the file structure and metadata requirements followed in the collating of Edinburgh Imaging fMRI results and their preparation for online sharing, as at July 2015.
    • Archiving and Sharing Functional MRI data 

      Pernet, Cyril
      This document describes the file structure and metadata requirements followed in the collating of Edinburgh Imaging fMRI results and their preparation for online sharing, as at January 2016.
    • Brain Imaging of Normal Subjects (BRAINS) age-specific MRI atlases from young adults to the very elderly (v1.0) 

      Dickie, David Alexander; Job, Dominic E; Rodriguez, David; Robson, Andrew; Danso, Samuel; Pernet, Cyril; Bastin, Mark E; Deary, Ian J; Shenkin, Susan D; Wardlaw, Joanna
      We have developed seven age-specific atlases of T1 brain MRI from 25 to 92 years.
    • Serial AFP measurement in confirmed HCC cases 

      Bird, Tom
      This dataset was used in the work to define a Bayesian analysis of serial AFP fluctuations in patients with hepatocellular carcinoma (HCC) in order to improve HCC detection. It consists of all 66 patients whom had AFP ...
    • Serial serum AFP results for HCC free patients in HCC surveillance cohort 

      Bird, Tom
      Data used for analysis is related submission to PLOS ONE. Ethical approval given for deposition in publicly available repository by local ethics committee. Individual patients each have a series of AFP results (serum) taken ...
    • Hippocampal manual segmentation 

      Anblagan, Devasuda; Deary, Ian J; Wardlaw, Joanna
      When analyzing specific parts of the brain (here a region called the hippocampus, known to be involved in memory), it is often necessary to manually delineate these regions. The manual tracing here illustrates hippocampu ...
    • Right eye retinal SLO image 

      Cameron, James; MacGillivray, Tom; Dhillon, Bal; Chandran, Siddharthan
      Scanning laser ophthalmoscope (SLO) high-resolution image of a healthy right eye retina, focused on the optic nerve head, and also showing the retinal blood vessels and macula. Analysis of the retina and blood vessels ...
    • MRI Variability in a Rat Model of Stroke 

      Milidonis, Xenios; McCabe, Chris; Macrae, Mhairi I.; Sena, Emily S.; Macleod, Malcolm R.; Marshall, Ian
      This dataset contains T2-weighted MRI scans of 21 different Sprague-Dawley rats that were subjected to permanent middle cerebral artery occlusion, as part of a study assessing the influence of gender in the progression of ...
    • SUPERSEDED - Reference segmentations of white matter hyperintensities from a subset of 20 subjects scanned three consecutive years 

      Valdés Hernández, Maria del C
      SUPERSEDED - THIS ITEM HAS BEEN REPLACED BY http://datashare.is.ed.ac.uk/handle/10283/2214. This dataset contains structural magnetic resonance imaging (MRI)-derived data from 20 participants enrolled in the Alzheimer’s ...
    • LIMO EEG Dataset 

      Guillaume, Rousselet
    • LIMO EEG v1.5 

      LIMO Team; Pernet, Cyril; Rousselet, Guillaume; Gaspar, Carl; Chauveau, Nicolas
      Magnetic- and electric-evoked brain responses have traditionally been analyzed by comparing the peaks or mean amplitudes of signals from selected channels and averaged across trials. More recently, tools have been developed ...
    • SUPERSEDED - Analysis of 4 Cortical Parcellation Protocols 

      Mikhael, Shadia
      ## This item has been superseded by the one which can be found at https://doi.org/10.7488/ds/1983 . ## Software packages for cortical parcellation generally combine tools which segment the brain into various regions, or ...
    • Examples of Automated Cortical Parcellation 

      Mikhael, Shadia
      The figures presented show examples of anatomical variability and the resulting automated parcellation from different software (also included a diagram of our search for such software). Software packages for cortical ...
    • Summary of the open source clinical studies up to May 2017 that perform texture analyses on Dynamic Contrast Enhanced (DCE)-MRI 

      Valdés Hernández, Maria del C; González Castro, Victor
      This is a Table with the Results of the systematic search in PubMed and Web of Science of open source clinical studies published up to May 2017, where texture analysis has been used in the analysis of Dynamic Contract ...
    • Data extraction and analysis of the systematic search on gender differences on brain MRI structures and connectivity 

      Martin, Sarah; Valdés Hernández, Maria del C
      Magnetic resonance imaging (MRI) is an invaluable imaging technique used in medicine, generating images of structures inside the body. The images produced are used to examine almost any part of the body and are essential ...
    • Cerebrovascular Reactivity MRI Protocol - Figures 

      Thrippleton, Michael; Shi, Yulu; Blair, Gordon; Hamilton, Iona; Waiter, Gordon; Schwarzbauer, Christian; Pernet, Cyril R; Andrews, Peter JD; Marshall, Ian; Doubal, Fergus; Wardlaw, Joanna
      Figures describing an MRI protocol, including tolerability and reproducibility, for measurement of cerebrovascular reactivity.
    • Edinburgh_NIH10 

      Bastin, Mark E; Wardlaw, Joanna; Pernet, Cyril R; Mikhael, Shadia
      This data set contains 10 normal healthy subjects ('sub-001' to 'sub-010') from a larger NIH funded project (NIH grant R01 EB004155) investigating changes in water diffusion parameters with age. Subjects underwent structural ...