Browsing School of Physics and Astronomy by Title
Now showing items 50-69 of 94
-
Nonequilibrium chromosome looping via molecular slip links
We propose a model for the formation of chromatin loops based on the diffusive sliding of molecular slip links. These mimic the behavior of cohesinlike molecules, which, along with the CTCF protein, stabilize loops which ... -
Nonuniversality and finite dissipation in magnetohydrodynamic turbulence
This dataset contains the results of the study discussed in the paper 'Nonuniversality and finite dissipation in decaying magnetohydrodynamic turbulence': "A model equation for the Reynolds number dependence of the ... -
Novel phases in ammonia-water mixtures under pressure
While ammonia and water readily form hydrogen-bonded molecular mixtures at ambient conditions, their miscibility under pressure is not well understood, yet crucial e.g. to model the interior of icy planets. We report here ... -
Nucleosome positions alone can be used to predict domains in yeast chromosomes
Simulation data related to the project "Nucleosome positions alone can be used to predict domains in yeast chromosomes". DNA is packaged into chromosomes, which are further organized into domains: Regions of the genome ... -
On the chain-melted phase of matter
Various single elements form incommensurate crystal structures under pressure, where a zeolite-type “host” sublattice surrounds a “guest” sublattice comprising 1D chains of atoms. On “chain melting,” diffraction peaks from ... -
Painting with bacteria: Smart templated self assembly using motile bacteria
Dataset supporting the manuscript entitled 'Painting with bacteria: Smart templated self assembly using motile bacteria': External control of the swimming speed of ‘active particles’ can be used to self assemble designer ... -
Particle-size effects in the formation of bicontinuous Pickering emulsions
We demonstrate that the formation of bicontinuous emulsions stabilized by interfacial particles (bijels) is more robust when nanoparticles rather than microparticles are used. Emulsification via spinodal demixing in the ... -
Phase behaviour of the quantum Lennard-Jones solid
The Lennard-Jones potential is perhaps one of the most widely-used models for the interaction of uncharged particles, such as noble gas solids. The phase diagram of the classical LJ solid is known to exhibit transitions ... -
A Phenomenological Description of BslA Assemblies Across Multiple Length Scales
Intrinsically interfacially active proteins have garnered considerable interest recently due to their potential use in a range of materials applications. Notably, the fungal hydrophobins are known to form robust and well ... -
Polymer Modelling Predicts Chromosome Reorganisation in Senescence
This dataset contains the data related to the figures and supplemental figures in the manuscript "Polymer Modelling Predicts Chromosome Reorganisation in Senescence". Lamina-associated domains (LADs) cover a large part of ... -
Polymer Simulations of Heteromorphic Chromatin Predict the 3-D Folding of Complex Genomic Loci
This dataset contains data corresponding to the figures and supplemental figures of the manuscript "Polymer Simulations of Heteromorphic Chromatin Predict the 3-D Folding of Complex Genomic Loci". Data sets from next ... -
Predicting the three-dimensional folding of cis-regulatory regions in mammalian genomes using bioinformatic data and polymer models
The three-dimensional organisation of chromosomes can be probed using methods such as Capture-C. However it is unclear how such population level data relates to the organisation within a single cell, and the mechanisms ... -
Pressure-induced localisation of the hydrogen-bond network in KOH-VI
Using a combination of ab initio crystal structure prediction and neutron diffraction techniques, we have solved the full structure of KOH-VI at 7 GPa. Rather than being orthorhombic and proton-ordered as had previously ... -
Probing the spatiotemporal dynamics of catalytic Janus particles with single-particle tracking and differential dynamic microscopy (Part 1)
Part 1 of datasets supporting the manuscript "Probing the spatiotemporal dynamics of catalytic Janus particles with single-particle tracking and differential dynamic microscopy". Abstract: We demonstrate differential dynamic ... -
Probing the spatiotemporal dynamics of catalytic Janus particles with single-particle tracking and differential dynamic microscopy (Part 2)
Part 2 of datasets supporting the manuscript "Probing the spatiotemporal dynamics of catalytic Janus particles with single-particle tracking and differential dynamic microscopy". Abstract: We demonstrate differential dynamic ... -
Quantitative morphological characterization of bicontinuous Pickering emulsions via interfacial curvatures
Bicontinuous Pickering emulsions (bijels) are a physically interesting class of soft materials with many potential applications including catalysis, microfluidics and tissue engineering. They are created by arresting the ... -
Quantum and isotope effects in lithium metal
The crystal structure of elements at zero pressure and temperature is the most fundamental information in condensed matter physics. For decades it has been believed that lithium, the simplest metallic element, has a ... -
Raw DFT data for "Post-aragonite phases of CaCO3 at lower mantle pressures"
This dataset contains DFT enthalpies and phonon spectra, computed with PBEsol, that together produce the theoretical static, and P-T quasiharmonic phase diagrams seen in the paper "Post-aragonite phases of CaCO3 at lower ... -
The role of correlations in the collective behaviour of microswimmer suspensions
In this work, we study the collective behaviour of a large number of self-propelled microswimmers immersed in a fluid. Using unprecedently large-scale lattice Boltzmann simulations, we reproduce the transition to bacterial ...
