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Depositordc.contributorGranneman, Sander
Funderdc.contributor.otherWellcome Trusten_UK
Data Creatordc.creatorGranneman, Sander
Date Accessioneddc.date.accessioned2017-10-05T15:30:21Z
Date Availabledc.date.available2017-10-05T15:30:21Z
Citationdc.identifier.citationGranneman, Sander. (2017). NAI Yeast Transcriptome Wide Data, [dataset]. University of Edinburgh. School of Biological Sciences. https://doi.org/10.7488/ds/2225.en
Persistent Identifierdc.identifier.urihttps://hdl.handle.net/10283/2916
Persistent Identifierdc.identifier.urihttps://doi.org/10.7488/ds/2225
Dataset Description (abstract)dc.description.abstractThese are fasta files containing collapsed read data from of our NAI yeast transcriptome data from the Selega et al Nature Methods paper published in 2017 ( https://doi.org/10.1038/nmeth.4068 ). Abbreviation: NAI: 2-methylnicotinic acid imidazolide.en_UK
Dataset Description (TOC)dc.description.tableofcontentsControl_1_1.fasta Forward collapsed read data of the first negative control dataset Control_1_2.fasta Reverse collapsed read data of the first negative control dataset Control_2_1.fasta Forward collapsed read data of the second negative control dataset Control_2_2.fasta Reverse collapsed read data of the second negative control dataset NAI_1_1.fasta Forward collapsed read data of the first NAI dataset NAI_1_2.fasta Reverse collapsed read data of the first NAI dataset NAI_2_1.fasta Forward collapsed read data of the second NAI dataset NAI_2_2.fasta Reverse collapsed read data of the second NAI dataseten_UK
Languagedc.language.isoengen_UK
Publisherdc.publisherUniversity of Edinburgh. School of Biological Sciencesen_UK
Relation (Is Version Of)dc.relation.isversionofhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE78208en_UK
Relation (Is Referenced By)dc.relation.isreferencedbyhttps://www.nature.com/nmeth/journal/v14/n1/full/nmeth.4068.htmlen_UK
Relation (Is Referenced By)dc.relation.isreferencedbySelega, A, Sirocchi, C, Iosub, I, Granneman, S & Sanguinetti, G 2017, 'Robust statistical modeling improves sensitivity of high-throughput RNA structure probing experiments' Nature Methods, vol 14, no. 1, pp. 83-89. DOI: 10.1038/nmeth.4068en_UK
Rightsdc.rightsCreative Commons Attribution 4.0 International Public Licenseen
Subjectdc.subjectRNA structure probingen_UK
Subjectdc.subjectNext Generation Sequencingen_UK
Subjectdc.subjectChemModSeqen_UK
Subjectdc.subjectSaccharomyces cerevisiaeen_UK
Subjectdc.subjectTranscriptome-wide RNA structure probingen_UK
Subject Classificationdc.subject.classificationBiological Sciences::Molecular Biology Biophysics and Biochemistryen_UK
Titledc.titleNAI Yeast Transcriptome Wide Dataen_UK
Alternative Titledc.title.alternativeNAI Yeast Transcriptome Wide Data Selega et al Nature Methods 2017en_UK
Typedc.typedataseten_UK

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  • Granneman Lab
    Exploring the role of RNA structure and RNA binding proteins in the regulation of gene expression

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