Grid cells are modulated by local head direction

Date Available

2020-06-24

Type

dataset

Data Creator

Nolan, Matthew
Gerlei, Klara
Passlack, Jessica
Hawes, Ian
Vandrey, Brianna
Stevens, Holly
Papastathopoulos, Ioannis

Publisher

University of Edinburgh

Relation (Is Referenced By)

https://www.biorxiv.org/content/10.1101/681312v2

Metadata

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Citation

Nolan, Matthew; Gerlei, Klara; Passlack, Jessica; Hawes, Ian; Vandrey, Brianna; Stevens, Holly; Papastathopoulos, Ioannis. (2020). Grid cells are modulated by local head direction, [dataset]. University of Edinburgh. https://doi.org/10.7488/ds/2855.

Description

In vivo tetrode recordings from the medial entorhinal cortex of mice during open field exploration. This data set contains recordings from grid cells, conjunctive cells and other spatial cells. Please look at Gerlei_et_at_2020_where_to_find_data_and_code.xlsx to find which files to download to replicate specific figures. If you only need the data from the sorted clusters, (firing times, position...) download SORTED_CLUSTERS.zip

Histology images to identify recording location. (45.73Mb)

Description of how the data and code are organized (40.17Kb)

Basic information on data set (144.7Mb)

Compare first and second half of recording (867.3Mb)

Compare first and second half of session (fields) (75.00Mb)

Compare sampling of mouse and rat data (49.78Kb)

Compare first and second half of session (no shuffle) (128.4Mb)

Compare first and second half of session (no shuffle, fields) (432.3Mb)

Plot head direction tuning frrom first vs second half of session (105.6Mb)

Schematics and examples for shuffled analysis (405.0Mb)

Pattern of preferred directions in fields (76.11Mb)

Plot head direction tuning against shuffled data (522.9Mb)

Plot head direction tuning against shuffled data for fields (474.7Mb)

Illustrations for Fig 1 (157.3Kb)

Shuffled head direction analysis (fields) (1.100Gb)

Shuffled head direction analysis (cells) (899.4Mb)

Shuffled movement direction analysis (fields) (71Mb)

Shuffled movement direction analysis (cells) (1.940Gb)

Running speed analysis (493.8Mb)

Tuning bias vs running speed analysis (720.6Mb)

Tuning bias vs trajectory bias analysis (55.22Mb)

Watson test for head direction (cells) (134.2Mb)

Watson test for head direction (fields) (29.89Mb)

Sorted clusters (356.2Mb)

Uniform model (321.4Mb)

Grid cell model (28.94Kb)

Pastoll model (181.4Mb)

Guanella model (828.8Mb)

Non-uniform model (564.3Mb)

Giocomo model (363.5Mb)

Burgess model (319.1Mb)

license_text (17.00Kb)

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