2020_Thesis_SupplementaryData_s1569052_Tissue-resident immune cells in health and disease: their heterogeneity and associated gene signatures

Patir, Anirudh; Freeman, Tom; McColl, Barry

Type

dataset

Data Creator

Patir, Anirudh
Freeman, Tom
McColl, Barry

Publisher

University of Edinburgh. The Roslin Institute

Metadata

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Citation

Patir, Anirudh; Freeman, Tom; McColl, Barry. (2021). 2020_Thesis_SupplementaryData_s1569052_Tissue-resident immune cells in health and disease: their heterogeneity and associated gene signatures, [dataset]. University of Edinburgh. The Roslin Institute. https://doi.org/10.7488/ds/2917.

Description

The dataset includes supplementary figures and tables in support of the University of Edinburgh thesis titled "Tissue-resident immune cells in health and disease: their heterogeneity and associated gene signatures".

FIGURE S2.1_Distribution of Pearson correlations for each dataset analysed.tif (20.59Mb)

FIGURE S2.2_IHC of published signature genes specifically coexpressed in the cerebellum.tif (16.89Mb)

TABLE S2.1_Comparison of the current and published human microglia signatures.xlsx (163.0Kb)

TABLE S2.2_Dataset information.xlsx (11.00Kb)

TABLE S2.3_Dataset derived microglial clusters and annotated core microglia signature genes.xlsx (88.73Kb)

TABLE S2.4_ToppGene enrichment analysis of core microglial genes.xlsx (152.0Kb)

TABLE S2.5_Clusters from Figure 4.xlsx (72.58Kb)

TABLE S2.6_Fold change in core and MAG for aging and Alzheimer's across regions.xlsx (122.6Kb)

TABLE S2.7_ToppGene enrichment analysis of MAG.xlsx (27.35Kb)

TABLE S2.8_ToppGene enrichment analysis of genes differentially expressed only in Alzheimer's.xlsx (40.22Kb)

TABLE S3.1_mmGen, sample clusters and annotation.xlsx (37.02Kb)

TABLE S3.2_ImmGen, gene clusters and annotation.xlsx (752.9Kb)