Browsing SynthSys by Date Accessioned
Now showing items 1-7 of 7
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The reduced kinome of Ostreococcus tauri: core eukaryotic signalling components in a tractable model species
(University of Edinburgh. SynthSys and School of Biological Sciences, 2014-06-24)## Background ## The current knowledge of eukaryote signalling originates from phenotypically diverse organisms. There is a pressing need to identify conserved signalling components among eukaryotes, which will lead ... -
Data files and analysis scripts for Seaton et al. "Photoperiodic control of the Arabidopsis proteome reveals a translational coincidence mechanism", bioRxiv 2017, Mol. Syst. Biol. 2018
Dataset description: The dataset comprises transcriptome (RNA levels) and proteome (protein levels) data for samples of the plant Arabidopsis thaliana, the alga Ostreococcus tauri and the cyanobacterium Cyanothece, along ... -
Real-time tracking of complex ubiquitination cascades using a fluorescent confocal on-bead assay
Supplementary data for Koszela et.al. Real-time tracking of complex ubiquitination cascades using a fluorescent confocal on-bead assay, BMC Biology, 2018 -
Timeseries used in Zielinski et al. Strengths and Limitations of Period Estimation Methods
Dataset contains timeseries data used for testing period analysis methods. The full details of the data are described in the actual paper, here there is only a short summary of methods generation. The synthetic test ... -
Peptide occurrences dataset from UniProt Feb 2018
Peptide occurences at different lengths, found in UniProt Feb 2018 release (UniProtKB/Swiss-Prot 2018_02 - February 28, 2018). An output of the Leverhulme funded project: Understanding the biological ramifications of a ... -
SUPERSEDED - Source data and scripts for "Intein-assisted bisection mapping systematically splits proteins for Boolean logic and inducibility engineering"
## This item has been replaced by the one which can be found at https://doi.org/10.7488/ds/3001 ## Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because ... -
Source data and scripts for "A systematic approach to inserting split inteins for Boolean logic gate engineering and basal activity reduction"
Split inteins are powerful tools for seamless ligation of synthetic split proteins. Yet, their use remains limited because the already intricate split site identification problem is often complicated by the requirement of ...
